Reviewed and updated October 9, 2026 by the SearchSystems.net editorial team. The arrest counts are the ones each agency reported to the FBI, as the FBI held them on October 8, 2026. The jail figures are from the Vera Institute of Justice's Incarceration Trends data. Every office link was opened and checked against the office's own site between September 23, 2026 and October 2, 2026.
San Juan County, Washington, has about 19,000 residents (2024 Census Bureau estimate). Every warrant for San Juan County comes from a judge of the San Juan County Superior Court or the District Court, is served by whichever agency finds the person, and is recorded in the court file of the case it was issued in. This guide says who issues and serves warrants here, where a person arrested on one is held, how to check for one and how one is cleared.
This guide covers who issues warrants, who serves warrants, after a warrant arrest, checking for a warrant, clearing a warrant and common questions.
Related guides: San Juan County public records, San Juan County arrest records, San Juan County inmate search, San Juan County criminal records, San Juan County court records, Washington arrest records and Washington inmate search.
Who Issues Warrants in San Juan County
In Washington an arrest warrant is signed by a judge. For San Juan County that means the San Juan County Superior Court, which hears felonies, civil cases over $100,000, divorces, probate and juvenile matters; the District Court, which takes misdemeanors, traffic infractions, small claims and civil cases up to $100,000, issues its own warrants on the cases before it. A city with a municipal court of its own issues warrants on the tickets and ordinance cases it tries.
When a defendant misses a court date the judge issues a bench warrant, and either kind of warrant lives in the court file of the case, kept by the County Clerk.
For San Juan County, SearchSystems opened and checked the court records page for the county at courts.wa.gov/court_dir/orgs/287.html (page title: Washington State Courts | Court Directory), phone 360-378-2399, 350 Court St, #7 Friday Harbor, WA 98250-7901, which answered when SearchSystems opened it on September 23, 2026.
Statewide, Washington Courts Search Case Records is the Administrative Office of the Courts' free statewide case search.
Who Serves Warrants in San Juan County
The San Juan County Sheriff's Office serves warrants in San Juan County.
A warrant issued in San Juan County is good anywhere in Washington, so it is served by whichever agency finds the person, in a traffic stop as often as at the door.
The San Juan County Sheriff's Office reported 212 arrests to the FBI for 2025; arrests on warrants are counted among them, not separately.
Each agency and what it reported is in San Juan County arrest records.
Where a Person Arrested on a Warrant from San Juan County Is Held
A person arrested on a warrant and kept in custody goes to the county jail, whichever agency made the arrest. The jail, run by the San Juan County Sheriff's Office, held about 8 people on an average day in 2021 by the Vera Institute of Justice's count and has a custody page SearchSystems verified at sanjuansheriff.org. The San Juan County inmate search guide covers the jail in full.
A person arrested in San Juan County on a warrant from another county is held at the same jail until that county takes custody.
How to Check for a Warrant in San Juan County
Whether a warrant is out from San Juan County shows in four places:
- The court file of the case, through the County Clerk at 360-378-2399, since a warrant is recorded in the case it was issued in.
- Washington Courts Search Case Records, the Administrative Office of the Courts' free statewide case search, for a case whose register of actions shows a warrant.
- The Prosecuting Attorney, phone 360-378-4101, which can say whether charges were filed; a warrant on a complaint follows the filing.
- The custody page of the San Juan County Sheriff's Office at sanjuansheriff.org, which shows people already arrested and booked, not open warrants.
Not one of the San Juan County pages SearchSystems verified (the court's and the prosecutor's) is a list of open warrants, so a check means asking the court or the prosecutor about a case by name.
Clearing a Warrant from San Juan County
A warrant is recalled by the court that issued it, so clearing one from San Juan County starts with the County Clerk at 360-378-2399: the case goes back on the calendar and the judge recalls the warrant when the person appears.
A missed date in a case before the District Court is handled by that court, not by the San Juan County Superior Court.
A lawyer can often arrange the appearance in advance. The Prosecuting Attorney's page SearchSystems verified is at sanjuancountywa.gov/254/Prosecuting-Attorney, phone 360-378-4101.
Frequently Asked Questions
Can I check for a warrant online in San Juan County?
Not from the San Juan County pages SearchSystems verified; none of them is a warrant list. Washington Courts Search Case Records is the Administrative Office of the Courts' free statewide case search, and a case whose register of actions shows a warrant is the record of it. The court file is the record of a warrant: ask the County Clerk at 360-378-2399.
Who serves warrants in San Juan County?
The San Juan County Sheriff's Office, and the agency that reports for the city where the person is found; a Washington warrant is valid anywhere in the state.
Where is a person arrested on a warrant in San Juan County held?
At the county jail, run by the San Juan County Sheriff's Office, if kept in custody.
How is a warrant from San Juan County cleared?
By appearing before the court that issued it; the judge recalls the warrant in court. The case is put back on the calendar through the County Clerk at 360-378-2399.
Is this the official San Juan County website?
No. SearchSystems.net is an independent public records guide, online since 1997. It links to the official county, court and state offices described above and does not hold records, charge for them or take requests.